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SRX2439517: RNAseq of Sea Lamprey: olfactory tissue after 24 hours exposure to 30 _g/mL of copper
1 ILLUMINA (Illumina HiSeq 2000) run: 16.1M spots, 3.2G bases, 2.1Gb downloads

Design: Total RNA samples were submitted to BGI Americas for RNAseq quantification sequencing
Submitted by: Universiy of Windsor
Study: Sea Lamprey transcriptomic response to copper
show Abstracthide Abstract
Copper is a common aquatic toxicant that is known to impair the olfactory system in fish. Sea lamprey, a species of conservation concern in its native areas of Europe and a detrimental invasive species in North America, rely on olfactory cues to migrate to natal streams and initiate spawning. Manipulating these olfactory-mediated behaviors is a critical component of the conservation and management of this species; however, anthropogenic inputs of copper to aquatic habitats have the potential to impede these efforts. To identify the transcriptomic mechanisms of copper-induced olfactory impairment we assay the whole transcriptome of olfactory tissue in lamprey exposed to environmentally relevant concentrations of copper.
Sample: olfactory tissue of lamprey treated with 30 _g/mL of copper for 24 hours, biological replicate 3
SAMN06173712 • SRS1874135 • All experiments • All runs
Library:
Name: pm_cu30_03_hiseq
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 16.1M spots, 3.2G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR512457016,094,9403.2G2.1Gb2017-06-01

ID:
3542874

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